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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX3_PICPA
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEYTAGLIR RNKKKFLISS GIIGVGYYVT KTINNKIQEF QNRIREENFA KEQIKRRFHQ  60
   61 TQSDCYMTFL SLLPVLCEPI MDDLPVETIT KQLQIRRLEK QIGNKDVKNS GSTVLSDDFS 120
  121 TSQEGAISED TNKPPELKSK NQLWQELKIK AITRFLTLIY CESLLIVFLH LQLNILSRKS 180
  181 YLETAIRLAS ETQGIDLVDQ ESNGDFSGNT QDENLSEQAF LSFSWWLLNK GWLEIKNKIE 240
  241 PCVEQHFGGI NPRQQLKINE FAELLNKCQN CIDLKVLNLT EEDIHLGVGV IEDQSQPVGR 300
  301 KSTNFITNAL LPPKEFEFFL LQQTNDLDFL SRFNNNIVNT ESLNMLLDEL NNYLNNADIN 360
  361 LIVNKLATLG ITKVLDEIVL NLLQKNRPNP ISDMNIRDID LNDFPPYKLA ALLANITKQS 420
  421 ISLTNNSVEN PILADLNNLP ELNDLSASVY SNFDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle