YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX3_PICAN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQYCRDLVS RHKKKLLFGT GVIAVSYAVS SFVSNKLAEL NERLKEENFA KEQIKRRFKQ  60
   61 TQNDCYMTFL SLLPVLTEPI YEALKVEEIT RELQNKRFER QKAKNAPVGN STDPALSTVL 120
  121 SDDFSVHNEK ENPMHTGVQQ TKSKTQLWNE LRNQSITRFL TLLYCESLLI VFLHLQLNIL 180
  181 SRRSYLETAI KLASKTKGIK LENESNVDLD PANLFLENDE ELAMGSSRQD ENLAEQAFLS 240
  241 YSWWLLNKGW IDIKNQVESS VEDIFGDINP RQELSIEEFA TLINKTQQII DKQIYAEKES 300
  301 EPLTAPGHSS STVITSLLPP ANMELFLLQQ TNDMEFLTNF NNNIQNSENV SKLLNELKGY 360
  361 LMNDQVSAII SLLVTVGISK VLDNIVVNLM NKQKNPDQEE QVPTEIPKVK LASLLASITK 420
  421 QSNQLTNNSL DNEVLYTLNN LQELDDLSAS VYSNFDA

Type	Start	End	Confidence
Signal Peptide	1	30	0.47
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	457	0.91