YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PE2R3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVWAPEHS VEAHSNQSSA ADGCGSVSVA FPITMMVTGF VGNALAMLLV VRSYRRRESK  60
   61 RKKSFLLCIG WLALTDLVGQ LLTSPVVILV YLSQRRWEQL DPSGRLCTFF GLTMTVFGLS 120
  121 SLLVASAMAV ERALAIRAPH WYASHMKTRA TPVLLGVWLS VLAFALLPVL GVGRYSVQWP 180
  181 GTWCFISTGP AGNETDSARE PGSVAFASAF ACLGLLALVV TFACNLATIK ALVSRCRAKA 240
  241 AASQSSAQWG RITTETAIQL MGIMCVLSVC WSPLLIMMLK MIFNQMSVEQ CKTQMGKEKE 300
  301 CNSFLIAVRL ASLNQILDPW VYLLLRKILL RKFCQIRDHT NYASSSTSLP CPGSSVLMWS 360
  361 DQLER

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.95
Transmembrane Helix	29	51	0.90
Cytoplasmic	52	66	0.87
Transmembrane Helix	67	89	0.89
Non-Cytoplasmic	90	108	0.86
Transmembrane Helix	109	130	0.93
Cytoplasmic	131	150	0.90
Transmembrane Helix	151	173	0.91
Non-Cytoplasmic	174	205	0.94
Transmembrane Helix	206	229	0.90
Cytoplasmic	230	256	0.91
Transmembrane Helix	257	279	0.88
Non-Cytoplasmic	280	365	0.78