YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PARB_PSEPU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKKRGLGR GLDALLSGPS VSALEEQAVK IDQKELQHLP VELVQRGKYQ PRRDMDPEAL  60
   61 EELAHSIRNH GVMQPIVVRP IGDNRYEIIA GERRWRATQQ AGLDTIPAMV REVPDEAAIA 120
  121 MALIENIQRE DLNPLEEAMA LQRLQQEFEL TQQQVADAVG KSRVTVANLL RLITLPDAIK 180
  181 TMLAHGDLEM GHARALLGLD ENRQEEGARH VVARGLTVRQ TEALVRQWLS DKPDPVEPSK 240
  241 PDPDIARLEQ RLAERLGSAV QIRHGNKGKG QLVIRYNSLD ELQGVLAHIR

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	290	0.99