YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215413845
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQPSRRKGG LGRGLAALIP TGPADGESGP PTLGPRMGSA TADVVIGGPV PDTSVMGAIY  60
   61 REIPPSAIEA NPRQPRQVFD EEALAELVHS IREFGLLQPI VVRSLAGSQT GVRYQIVMGE 120
  121 RRWRAAQEAG LATIPAIVRE TGDDNLLRDA LLENIHRVQL NPLEEAAAYQ QLLDEFGVTH 180
  181 DELAARIGRS RPLITNMIRL LKLPIPVQRR VAAGVLSAGH ARALLSLEAG PEAQEELASR 240
  241 IVAEGLSVRA TEETVTLANH EANRQAHHSD ATTPAPPRRK PIQMPGLQDV AERLSTTFDT 300
  301 RVTVSLGKRK GKIVVEFGSV DDLARIVGLM TTDGRDKGLH RDAL

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	344	0.99