YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PANE_PYRAB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYILGAGA IGSLFGGLLA NAGEDVLLIG RDPHVSAINE KGLKIVGIKD LNVKVEATTR  60
   61 VPEEKPDLIV LATKSYSTIE ALKSARHIVK GSWVLSIQNG IGNEDKIIEF GGKAIGGITT 120
  121 NGAMVEAPGV IKWTGKGVTI IGLYPQGKEK FIEKVADVFN SADIETHVSE NIISWIWAKA 180
  181 IVNSAINPIG TLLEVKNKVI RENDFLLSMA MEVVKEGCRV ALQNGIEFDV PPMDLFFQTL 240
  241 EQTRENYNSM LQDIWRGKKT EVDYINGKIV EYAKAVNLEA PMNLLLWGLI KGKEALEGKK 300
  301

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	300	0.99