YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OV16_ONCVO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCLQVVIAI VLYSFGKISA ENANCKKCTP MLVDSAFKEH GIVPDVVSTA PTKLVNVSYN  60
   61 NLTVNLGNEL TPTQVKNQPT KVSWDAEPGA LYTLVMTDPD APSRKNPVFR EWHHWLIINI 120
  121 SGQNVSSGTV LSDYIGSGPR KGTGLHRYVF LVYKQPGSIT DTQHGGNRRN FKVMDFANKH 180
  181 HLGNPVAGNF FQAKHED

Type	Start	End	Confidence
Signal Peptide	1	20	0.55
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	197	0.99