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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OSTA_SALTY
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRIPTLLA TMIASALYSH QGLAADLASQ CMLGVPSYDR PLVKGDTNDL PVTINADNAK  60
   61 GNYPDDAVFT GNVDIMQGNS RLQADEVQLH QKQAEGQPEP VRTVDALGNV HYDDNQVILK 120
  121 GPKGWANLNT KDTNVWEGDY QMVGRQGRGK ADLMKQRGEN RYTILENGSF TSCLPGSDTW 180
  181 SVVGSEVIHD REEQVAEIWN ARFKVGPVPI FYSPYLQLPV GDKRRSGFLI PNAKYTTKNY 240
  241 FEFYLPYYWN IAPNMDATIT PHYMHRRGNI MWENEFRYLT QAGEGVMELD YLPSDKVYED 300
  301 DHPKEGDKHR WLFYWQHSGV MDQVWRFNVD YTKVSDSSYF NDFDSKYGSS TDGYATQKFS 360
  361 VGYAVQNFDA TVSTKQFQVF NDQNTSSYSA EPQLDVNYYH NDLGPFDTRI YGQAVHFVNT 420
  421 KDNMPEATRV HLEPTINLPL SNRWGSLNTE AKLMATHYQQ TNLDSYNSDP NNKNKLEDSV 480
  481 NRVMPQFKVD GKLIFERDMA MLAPGYTQTL EPRVQYLYVP YRDQSGIYNY DSSLLQSDYN 540
  541 GLFRDRTYGG LDRIASANQV TTGVTTRIYD DAAVERFNVS VGQIYYFTES RTGDDNIKWE 600
  601 NDDKTGSLVW AGDTYWRISE RWGLRSGVQY DTRLDSVATS SSSLEYRRDQ DRLVQLNYRY 660
  661 ASPEYIQATL PSYYSTAEQY KNGINQVGAV ASWPIADRWS IVGAYYFDTN SSKPADQMLG 720
  721 LQYNSCCYAI RVGYERKLNG WDNDKQHAIY DNAIGFNIEL RGLSSNYGLG TQEMLRSNIL 780
  781 PYQSSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle