YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OSR8_ORYSJ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGRCCTFL EILLAIILPP LGVFLRFGCC SMEFCICLLL TILGYVPGII YAVYVLVALD  60
   61 SDQYQREYHT LA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.55
Transmembrane Helix	7	29	0.79
Non-Cytoplasmic	30	33	0.42
Transmembrane Helix	34	58	0.85
Cytoplasmic	59	72	0.46