YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ORM1_SACMO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNATWVDQRG AWIIHVVVIT LLKLFFNLFP GVTAEWSWTL TNMTYVVGSY VMFHLIKGTP  60
   61 FDFNGGAYDN LTMWEQIDDE TLFTPSRKFL IIVPIALFLV STHYAHYDLK MFSWNCFLTT 120
  121 FVAVVPKLPV THRLRISIPG ITGRAQIS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.74
Transmembrane Helix	11	31	0.89
Non-Cytoplasmic	32	37	0.56
Transmembrane Helix	38	56	0.63
Cytoplasmic	57	88	0.59
Transmembrane Helix	89	107	0.82
Non-Cytoplasmic	108	110	0.70
Transmembrane Helix	111	131	0.68
Cytoplasmic	132	148	0.77