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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|168241749, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPLLTSFS LPPFSAIKPE HVVPAVTKAL ADCRAAVEGV VAHGAPYSWE NLCQPLAEAD  60
   61 DVLGRIFSPI SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYNAY RDLRDGDHYA 120
  121 TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL 180
  181 ITDEAELAGM PESALAAAKA QAEAKEQEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS 240
  241 TRASDQGPNA GKWDNSPVME EILALRHELA QLLGFENYAH ESLATKMAEN PQQVLDFLTD 300
  301 LAKRARPQGE KELAQLRAFA KAEFGVEELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN 360
  361 KAVNGLFEVV KRIYGITAKE RTDVDVWHPE VRFFELYDEN NELRGSFYLD LYAREHKRGG 420
  421 AWMDDCVGQM RKADGTLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT 480
  481 RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK 540
  541 NYQAALFILR QLEFGLFDFR LHAEFNPQQG AKILETLFEI KKQVAVVPSP TWGRFPHAFS 600
  601 HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK 660
  661 RFRGREPQLD AMLEHYGIKG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle