YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ONCM_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAQRMQRTL LSLVLRLLLL CTVATGKCSG KYHELLLQLQ RQADLMQDPS TLLDPYIHLQ  60
   61 GLHSPVLQEH CRERPGDFPS EDALWRLSRQ DFLQTLNTTL GLILRMLSAL QQDLPEAAHQ 120
  121 QAEMNVRGFG NNIHCMAQLL RGSSDPKAAE PTQPGPGPTP LPPTPPSSTF QRKLRNCGFL 180
  181 RGYHRFMRTA GQVLRGWGER QGRSRRHSPC RALKRGARRT QPFPEIRRLA PRGQPPGSLW 240
  241 GAPAR

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	245	0.99