YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OMPK_VIBPH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLLALSL LAATSAPVLA ADYSDGDIHK NDYKWMQFNL MGAFNELPGF PDGSNHDYLE  60
   61 MEFGGRSGIF DLYGYVDVFN LASDPGSDKS GKEKIFMKFA PRMSLDAVTG KDLSFGPVQE 120
  121 LYVSTLMEWG GASEVNSQKI GLGSDVMVPW LGKIGLNLYG TYDSNKKDWN GYQISTNWFK 180
  181 PFYFFENGSF ISYQGYIDWQ FGMKDEYSSS SYGGAMFNGI YWHSDRFAVG YGLKGYKNIY 240
  241 GIKEVNGVDS TGFGHYIAVT YKF

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	263	0.99