YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11277511
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSLIALTL AALPVAAMAD VTLYGTIKTG VETSRSVEHN GGQVVSVETG TGIVDLGSKI  60
   61 GFKGQEDLGN GLKAIWQVEQ KASIAGTDSG WGNRQSFIGL KGGFGKLRVG RLNSVLKDTG 120
  121 DINPWDSKSD YLGVNKIAEP EARLISVRYD SPEFAGLSGS VQYALNDNVG RHNSESYHAG 180
  181 FNYKNGGFFV QYGGAYKRHQ DVDDVKIEKY QIHRLVSGYD NDALYASVAV QQQDAKLVED 240
  241 NSHNSQTEVA ATLAYRFGNV TPRVSYAHGF KGSVDDAKRD NTYDQVVVGA EYDFSKRTSA 300
  301 LVSAGWLQEG KGENKFVATA GGVGLRHKF

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	329	0.99