YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOM22_NEUCR, OM2...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLTEVEDE HFQQPQVGPE EDDEDFTDTD SEISVDSDYE SQETFTDRLY ALRDMVSPTT  60
   61 RGWFYHKYST TTNFVKSTLS FAGRAAWAVS VSGLLIGVPF AIAFAEDQNY AAMEQEARMR 120
  121 ELGSDVLTAG GEGQAGTAEK TLAAIGGEGA RPAL

Type	Start	End	Confidence
Cytoplasmic	1	84	0.77
Transmembrane Helix	85	105	0.81
Non-Cytoplasmic	106	154	0.91