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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: oaf-PD
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKEEHPHQ SIETAANAAR QAQVRWRMAH LKALSRTRTP AHGNCCGRVV SKNHFFKHSR  60
   61 AFLWFLLCNL VMNADAFAHS QLLINVQNQG GEVIQESITS NIGEDLITLE FQKTDGTLIT 120
  121 QVIDFRNEVQ ILKALVLGEE ERGQSQYQVM CFATKFNKGD FISSAAMAKL RQKNPHTIRT 180
  181 PEEDKGRETF TMSSWVQLNR SLPITRHLQG LCAEAMDATY VRDVDLKAWA ELPGSSISSL 240
  241 EAATEKFPDT LSTRCNEVSS LWAPCLCNLE TCIGWYPCGL KYCKGKGVAG ADSSGAQQQA 300
  301 QPTNYRCGIK TCRKCTQFTY YVRQKQQCLW DEXRRGELQL MQMRCARRRN GSEFGDDASA 360
  361 TCPGGETRAA TTTATITGGG AGGSGKDTTA ATTTTTNKLR QLLLLVQQQM PFALWSFPVH 420
  421 HISQSHHQSQ SQHKPSRQQK QHQHHSQVAP TSHHQSSSST PPTPSTSSSP PSSSSSSSSS 480
  481 AMAAIVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle