YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUXM_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSSPTYT ISKTLNTNYP LIDNDPHFRR VIGYARPSDY VHGTVAGAAG PGLLYLMEKM  60
   61 APSGVGKGGF PKAMRLATAV GFFGGFLYFY QRSILRFYGM SENAREVQMD MREMVDKVKA 120
  121 GQPLYGVSTL PVDVQGMAAR QSRYSALFFA VLPWFNFVNH NQHGVDTAKY YQQAERELEA 180
  181 ERLGKGSSS

Type	Start	End	Confidence
Cytoplasmic	1	37	0.85
Transmembrane Helix	38	57	0.75
Non-Cytoplasmic	58	72	0.73
Transmembrane Helix	73	90	0.91
Cytoplasmic	91	189	0.73