YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NDUS8_TOBAC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAILARKSL SALRSRQLVL AGQAWQQGAN TSNGTLLGTR TFATNDSFST DKDDEEREQL  60
   61 AKELSKDWNS VFEQQINTLF LTEMVRGLML TLKYFFEKKV TINYPFEKGP LSPRFRGEQP 120
  121 LRRYPTGEER CIACKLCEAI CPAQAITIEA EAREDGSRRT TRYDIDMTKC IYCGFCQEAC 180
  181 PVDAIVEGPN FEFATETHEE LLYDKEKLLE NGDRWETEIA ENLRSESLYR

Type	Start	End	Confidence
Signal Peptide	1	31	0.73
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	230	0.99