YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUCM_ERWCH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRNLVIFAV LGAGLTTLAA AGQDINNFTQ AKAAAAKIHQ DAPGTFYCGC KINWQGKKGT  60
   61 PDLASCGYQV RKDANRASRI EWEHVVPAWQ FGHQRQCWQD GGRKNCTKDD VYRQIETDLH 120
  121 NLQPAIGEVN GDRGNFMYSQ WNGGERQYGQ CEMKIDFKSQ LAEPPERARG AIARTYFYMR 180
  181 DRYNLNLSRQ QTQLFDAWNK QYPATTWECT REKRIAAVQG NHNPYVQQAC SPDAAPYYNG 240
  241 LSLIMIAAVA TVAARWLTPA GHLPSD

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	266	0.94