YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22325554
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFAPISIY LVISLLVSLI LLGVPFPFAS NSSTYPEKLS AYECGFDPSG DARSRFDIRF  60
   61 YLVSILFLIP DLEVTFFFPW AVPPNKIDLF GFWSMMAFLF ILTIGFLYEW KRGASDRE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	29	0.91
Cytoplasmic	30	59	0.81
Transmembrane Helix	60	81	0.83
Non-Cytoplasmic	82	88	0.83
Transmembrane Helix	89	108	0.96
Cytoplasmic	109	118	0.84