YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NRP2_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMFPLTWIF LALYFSGHKV RSQQDPPCGG RLNSKDAGYI TSPGYPQDYP SHQNCEWVVY  60
   61 APEPNQKIVL NFNPHFEIEK HDCKYDFIEI RDGDSESADL LGKHCGNIAP PTIISSGSVL 120
  121 YIKFTSDYAR QGAGFSLRYE IFKTGSEDCS KNFTSPNGTI ESPGFPEKYP HNLDCTFTIL 180
  181 AKPRMEIILQ FLTFDLEHDP LQVGEGDCKY DWLDIWDGIP HVGPLIGKYC GTKTPSKLRS 240
  241 STGILSLTFH TDMAVAKDGF SARYYLVHQE PPENFQCNAP LGMESGRIAN EQISASSTFS 300
  301 DGRWTPQQSR LHGDDNGWTP NVDSNKEYLQ VDLRFLTMLT AIATQGAISR ETQKGYYVKS 360
  361 YKLEVSTNGE DWMVYRHGKN HKVFQANNDA TELVLNKLHT PLLTRFIRIR PQTWHLGIAL 420
  421 RLELFGCRVT DAPCSNMLGM LSGLIADTQI SASSTREYLW SPSAARLVSS RSGWFPRNPQ 480
  481 AQPGEEWLQV DLGTPKTVKG VIIQGARGGD SITAMEARAF VRKFKVSYSL NGKDWEYIQD 540
  541 PRTQQPKLFE GNMHYDTPDI RRFEPVPAQY VRVYPERWSP AGIGMRLEVL GCDWTDSKPT 600
  601 VETLGPTVKS EETTTPYPMD EDATECGENC SFEDDKDLQL PSGFNCNFDF PEETCGWMYD 660
  661 RAKWLQSTWI SSANPNDRTF PDDKNFLKLQ SDGGREGQFG RLISPPVHLP RSPVCMEFQY 720
  721 QAMGGHGVAL QVVREARQES KLLWVIREDQ GSEWKHGRII LPSYDMEYQI VFEGVIGKGR 780
  781 SGEISIDDIR ISTDVPLENC MEPISAFAVD IPEIHGGEGY EDEIDDDYEG DWNNSSSTSG 840
  841 AGSPSSGKEK SWLYTLDPIL ITIIAMSSLG VLLGATCAGL LLYCTCSYSG LSSRSCTTLE 900
  901 NYNFELYDGL KHKVKINHQK CCSEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle