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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NRP1A_DANRE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCGLVLILF TGIFLIVSAL KNDKCGDNIR ITSANYLTSP GYPVSYYPSQ KCIWVITAPG  60
   61 PNQRILINFN PHFDLEDREC KYDYVEVRDG VDENGQLVGK YCGKIAPSPV VSSGNQLFIK 120
  121 FVSDYETHGA GFSIRYEIFK TGPECSRNFT SSSGVIKSPG FPEKYPNNLD CTFMIFAPKM 180
  181 SEIVLEFESF ELEPDTQPPA GVFCRYDRLE IWDGFPGVGP YIGRYCGQNT PGRIISYTGT 240
  241 LAMTINTDSA IAKEGFSANF TVLERTVPDD FDCTEPLGME TGEIHSDQIM ASSQYSNSWS 300
  301 AERSRLNNPE NGWTPLKDTN KEWIQVDLGF LRFVSAIGTQ GAISQETKKK YYVKEYKVDV 360
  361 SSNGEDWITI KDGPKQKLFQ GNTNPTDVVK AKFPKPTLTR YLRIRPINWE TGIALRFEVY 420
  421 GCKISEYPCS GMLGMVSGLI TDSQITVSSH IERTWVSENA RLLTSRSGWM LLPQSQPYAD 480
  481 EWLQIDLAEE KLVKGLIIQG GKHRDNKVFM KKFRLGYSNN GSDWKLVMDA TGNKPKIFEG 540
  541 NLNYDTPALR TMEPVLTRFV RIYPDRGTPA GMGLRLELLG CEMEVPTVPP TTPAASTTPS 600
  601 DECDDDQANC HSGTGDGYDQ TGGTTATETI REMSTIPAFL WFACDFGWAN DPSFCGWISE 660
  661 DSGFRWQIQS SGTPTLNTGP NMDHTGGSGN FIYTLATGAQ ETEVARLVSP SVSGQDSDLC 720
  721 LSFWYHMFGS HIGTLHIKQR RETSQGSADV LLWTVSGHQG NRWREGRVLI PHSNKPYQVI 780
  781 IESVVERKSW GDIAVDDIKI LDNVNMADCK DPDVPAEPIQ PEDNFNEIMV DITDFPDIVE 840
  841 NPDIGGAGNM LKTLDPILIT IIAMSALGVF LGAICGVVLY CACSHSGMSD RNLSALENYN 900
  901 FELVDGVKLK KDKLNSQNSY SEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle