YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|294504172\|ref...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRHRLCRF RKSKHVRHQR FRSRIFHRDS AVAKEMKKPF VVVLTGAGIS AESGIRTFRA  60
   61 DDGLWEDHRV EDVATPEGYR RDPELVQRFY NERRRQLQQP DIAPNAAHFA LADLEAVLGD 120
  121 NLVLITQNID NLHERAGSKR VIHMHGELLK VRCTQSGQVL DWQGDLSADE RCHCCQFPSP 180
  181 LRPHIVWFGE MPMGMDDIYQ ALAEADFFIS IGTSGHVYPA AGFVHESHLH GAHTVELNLE 240
  241 PSQVESQFDE KHYGLASKVV PEYIREFLTT CGENRQGD

Type	Start	End	Confidence
Signal Peptide	1	53	0.89
N-region	1	44
H-region	45	50
C-region	51	53
Cleavage Site	53	54
Non-Cytoplasmic	54	278	0.99