YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NOGG2_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSITRALPL LLLLLLCAHG TASQHHLRLR PLPSEGLPVP DLIENPDPEH DPREQDLSEK  60
   61 TLLKKLGSNF DANFMSIHLP AQLNASAPPE LPRLPMPAEL KKLDLTETPY GRRVKVGKKA 120
  121 RRKFLQWLWM YTHCPVLYTW KDLGLRFWPR YIKEGNCFSE RSCSFPEGMS CKPVKAVTKT 180
  181 FLRWYCQGFM RQKYCTWIQV QYPIISQCKC SC

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	212	0.99