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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NALDL_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWVKILGVA LGAAALLGLG IILGHFAIPK ATSPLTSSTS DSQDLDLAIL DSVMGQLDAS  60
   61 RIRENLRELS KEPHVATSPR DEALVQLLLG RWKDTATGLD SAKTYEYRVL LSFPNAEQPN 120
  121 SVEVVGPNGT TFHSFQPFEK NLTGEQAGPN VLQPYAAYAP PGTPKGLLVY ANQGSEEDFK 180
  181 ELETQGINLE GTIALTRYGG VGRGAKAINA AKHGVVGVLV YTDPGDINDG KSLPNETFPN 240
  241 SWRLPPSGVE RGSYYEYFGD PLTPYLPAHP SSFRLDPHNT SGFPPIPTQP IGFEDARDLL 300
  301 CNLTGTSAPA FWQGALGCEY KLGPGFEPNG SFPAGSEVKV SVHNRLELRT SSNVLGIIQG 360
  361 AVEPDRYVIY GNHRDSWVHG AVDPSSGTAV LLEISRVLGT LLKKGTWRPR RSIIFASWGA 420
  421 EEFGLIGSTE FTEEFLSKLQ ERTVAYINVD ISVFSNATLR AQGTPPVQSV IFSATKEISA 480
  481 PGSSGLSIYD NWIRYTNRTS PVYGLVPSLG TLGAGSDYAA FVHFLGITSM DLAYTYDRSK 540
  541 TSARIYPTYH TAFDTFDYVE KFLDPGFSSH QAVARTAGSV LLRLSDSLFL PLNVSDYSET 600
  601 LQSFLQAAQE ALGTQLEKQN ISLGPLVTAV ANFKAAAASL GEHILTLQKS SPDPLQVRMV 660
  661 NDQLMLLERA FLNPRAFPEE RHYSHVLWAP NTASVDTFPG LANAYAKAQE INSGSEAWAE 720
  721 VQRQLSIVVT ALEGAAATLV PVADL

YRC Informatics Platform - Version 3.0
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