YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NDUB8_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAARAGVLG VRWLQKAARN VVPLGARTAS HITKDMLPGP YPKTPEERAA AAKKYNMRVE  60
   61 DYEPYPDDGT GYGDYPKLPD RSQQERDPWY DWDHPDLRLN WGEPMHWDLD MYIRNRVDTS 120
  121 PTPVNWNLMC KHLFGFVAFM LFMFWVGETY PAYQPVGPKQ YPYNNLYLER GGDPNKEPEP 180
  181 VVHYEI

Type	Start	End	Confidence
Cytoplasmic	1	127	0.82
Transmembrane Helix	128	147	0.75
Non-Cytoplasmic	148	186	0.91