YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NCTR3_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVLLIVFI MVYAGSCAIW VSQPPEIRAQ EGTTASLPCS FNASRGKAAI GSATWYQDKV  60
   61 APGMELSNVT PGFRGRVASF SASQFIRGHK AGLLIQDIQS HDARIYVCRV EVLGLGVGTG 120
  121 NGTRLVVEKE PPQQASNAEP ERAAYTSLLL RAGVYALSFL SVATGSVIYY QGKCLCHVGN 180
  181 TATPPTASEE RF

Type	Start	End	Confidence
Signal Peptide	1	18	0.93
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	192	0.97