YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NB5R2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSFFRRLA RSAPITFPVA FGSQSKSGSG AFRFSTGAIA ALSGGFSYYY LTSGNNLVYL  60
   61 DQAKEETGPK TALNPDKWLE FKLQDTARVS HNTQLFRFSF DPSAELGLHV ASCLLTRAPL 120
  121 GYNAEGKTKY VIRPYTPISD PEAKGYFDLL IKVYPDGKMS QHFASLKPGD VLEVKGPVEK 180
  181 FKYSPNMKKH IGMIAGGSGI TPMLQVIDAI VKNPEDNTQI SLLYANVSPD DILLKQKLDV 240
  241 LQANHPNLKI FYTVDNPTKN WKGGVGYISK DMALKGLPLP TDDTLILVCG PPGMMEHISG 300
  301 GKAPDWSQGE VKGILKELGY TEEMVFKF

Type	Start	End	Confidence
Signal Peptide	1	30	0.78
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	328	0.98