YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IMPA1_XENLA
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDRWQECMD FLAVSIARKA GSVVCAALKE DVSIMVKTSL APADLVTATD QKVEEMIISS  60
   61 IKEKYPSHSF IGEESVAAGA GSTLTDNPTW IIDPIDGTTN FVHRFPFVAV SIGFAVHKQV 120
  121 EFGVVYSCVE DKMYTGRKGK GSFCNGQKLQ VSGQKDITKS MIITELGSNR NPEFIKTVSL 180
  181 SNMERLLCIP IHGIRAVGTA AVNMCLVATG GADAYYEMGL HCWDMAAASV IVTEAGGTIL 240
  241 DATGGLFDLM SCRIISASSR EIAERIAKEL QIIPLERDDG KSTNS

Type	Start	End	Confidence
Cytoplasmic	1	190	0.54
Transmembrane Helix	191	212	0.50
Non-Cytoplasmic	213	285	0.57