YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURC_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGKIEKIHF VGIGGIGMSG IAEVLLNLGY KVSGSDLKQS DTTDRLASLG GEIRFGHGRE  60
   61 NVADVDVVVT STAVRDDNPE VVEAKRRMIP VIPRAEMLAE LMRMKYGIAI AGTHGKTTTT 120
  121 SMVATVLTHG GIDPTIVIGG KLNTLGTNAK LGQGQFLVAE ADESDGSFLK LSPTIAVVTN 180
  181 IDADHLDFYT GGIEQIKDTF VDFINKIPFY GLAVLCLEDR NIAEILPRVK KRFVTYGLSS 240
  241 QADIRATHIR LEGGTTSFVA HYKGYRMGEV SFSMPGAHNV LNALACIAVA MELDVPFSQI 300
  301 QEGFATFGGV GRRFQVKGEV NGITVVDDYG HHPAEIRATL AAGKSGWPER RLVVAFQPHR 360
  361 FSRTRELFAE FVTCFYDADV LVLTDIYPAG EAPIEGVSAE RLAEEIRKHG QRDVTYVADR 420
  421 EALPEHLLTI VQPGDIVLTL GAGNIWQSGE AFLAKLEEAR QA

Type	Start	End	Confidence
Cytoplasmic	1	7	0.67
Transmembrane Helix	8	30	0.65
Non-Cytoplasmic	31	462	0.97