YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIM:610235\|Ensem...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQPRGAE RDLYRDTWVR YLGYANEVGE AFRSLVPAAV VWLSYGVASS YVLADAIDKG  60
   61 KKAGEVPSPE AGRSARVTVA VVDTFVWQAL ASVAIPGFTI NRVCAASLYV LGTATRWPLA 120
  121 VRKWTTTALG LLTIPIIIHP IDRSVDFLLD SSLRKLYPTV GKPSSS

Type	Start	End	Confidence
Cytoplasmic	1	33	0.59
Transmembrane Helix	34	48	0.46
Non-Cytoplasmic	49	88	0.60
Transmembrane Helix	89	111	0.53
Cytoplasmic	112	120	0.61
Transmembrane Helix	121	141	0.65
Non-Cytoplasmic	142	166	0.79