YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MS2A_DROMA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQILLCSQI LLLFFTVANC DGEHQLDSSV DLKSAVLKNV APKNVATQAE IVKDDVALKS  60
   61 GKKGDYVMDI EVSDMPLDDY PINNSKSRKN SSTLPSPILT DKLNQGSNQI ALKALKHRLV 120
  121 MEQNNNLFLR NHSVSLMNEI EARKTDIIQA RQLNIDLELE LESLKRKLSE MNVQNARKST 180
  181 KSCKKRPSKD IAPPVNQLQE VIVKNTYRNK YLTLLTQLAQ KINYEIANVN NPATDVPTGK 240
  241 SPSEGNPSTT

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	250	0.99