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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MPRI_BOVIN
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAAGRSSH LGPAPAGRPP RCPLLLQLQL LLLLLLLPPG WVPGAAGTQG AEFPELCSYT  60
   61 WEAVDTKNNM LYKINICGNM GVAQCGPSSA VCMHDLKTDS FHSVGDSLLK TASRSLLEFN 120
  121 TTVNCKQQNH KIQSSITFLC GKTLGTPEFV TATDCVHYFE WRTTAACKKN IFKANKEVPC 180
  181 YAFDRELKKH DLNPLIKTSG AYLVDDSDPD TSLFINVCRD IEVLRASSPQ VRVCPTGAAA 240
  241 CLVRGDRAFD VGRPQEGLKL VSNDRLVLSY VKEGAGQPDF CDGHSPAVTI TFVCPSERRE 300
  301 GTIPKLTAKS NCRFEIEWVT EYACHRDYLE SRSCSLSSAQ HDVAVDLQPL SRVEASDSLF 360
  361 YTSEADEYTY YLSICGGSQA PICNKKDAAV CQVKKADSTQ VKVAGRPQNL TLRYSDGDLT 420
  421 LIYFGGEECS SGFQRMSVIN FECNQTAGNN GRGAPVFTGE VDCTYFFTWD TKYACVHEKE 480
  481 ALLCGVSDGK QRFDLSALAR HSELEQNWEA VDGSQREAEK KHFFINICHR VLQTGQARGC 540
  541 PEDAAVCAVD KNGSKNLGRF ISSPTREKGN IQLSYSDGDE CGGGQKIITN ITLMCKPGDL 600
  601 ESAPVLTTSR ADGCFYEFEW RTAAACVLSR TEGDNCTVFD SQAGFSFDLT PLTKKDAYKV 660
  661 ETDKYEFHIN VCGPVSVGAC PPDSGACQVS RSDRKSWNLG RSNAKLSYYD GMIQLTYRDG 720
  721 TPYNNEKRTP RATLITFLCD RDAGVGFPEY QEEDNSTYNF RWYTSYACPE EPLECIVTDP 780
  781 VTLDQYDLSR LAKSEGGPGG NWYSLDNGGA RSTWRKYYIN VCRPLNPVPG CDRYASACQM 840
  841 KYQGEQGSYS ETVSISNLGV AKTGPMVEDS GSLLLEYVNG SACTTSDQRR TTYTTRIHLV 900
  901 CSTGSLYTHP IFSLNWECVV SFLWNTAAAC PIRITTDIDQ VCSIKDPNSG YVFDLNPLNN 960
  961 SRGYVVLGIG KTFLFNVCGD MPACGTLDGK PASGCEAEVQ MDDMKTLKPG RLVGLEKSLQ1020
 1021 LSTEGFITLN YTGLPSHPNG RADAFIIRFV CNDDVYPGTP KFLHQDIDSS LGIRDTFFEF1080
 1081 ETALACVPSP VDCQVTDPAG NEYDLSGLSK ARKPWTAVDT FDEGKKRTFY LSVCTPLPYI1140
 1141 PGCHGTAVGC CLVTEDSKLN LGVVQISPQV GANGSLSLVY VNGDKCKNQR FSTRINLECA1200
 1201 HTTGSPTFQL QNDCEYVFLW RTVEACPVVR AEGDYCEVRD PRHGNLYNLI PLGLNDTVVR1260
 1261 AGEYTYYFRV CGELTSGVCP TSDKSKVISS CQEKRGPQGF QKVAGLFNQK LTYENGVLKM1320
 1321 NYTGGDTCHK VYQRSTTIFF YCDRSTQAPV FLQETSDCSY LFEWRTQYAC PPYDLTECSF1380
 1381 KNEAGETYDL SSLSRYSDNW EAVTGTGSTE HYLINVCKSL SPQAGSDPCP PEAAVCLLGG1440
 1441 PKPVNLGRVR DSPQWSQGLT LLKYVDGDLC PDQIRKKSTT IRFTCSESHV NSRPMFISAV1500
 1501 EDCEYTFSWP TAAACAVKSN VHDDCQVTNP ATGHLFDLSS LSGRAGFTAA YSEKGLVYLS1560
 1561 VCGDNENCAN GVGACFGQTR ISVGKASKRL TYVDQVLQLV YEGGSPCPSK TGLSYKSVIS1620
 1621 FVCRPEVGPT NRPMLISLDK RTCTLFFSWH TPLACEQTTE CSVRNGSSLI DLSPLIHRTG1680
 1681 GYEAYDESED DGSDTSPDFY INICQPLNPM HGLACPAGTA VCKVPVDGPP IDIGRVAGPP1740
 1741 ILNPIANEVY LNFESSTPCL ADRHFNYTSL ITFHCKRGVS MGTPKLLRTS VCDFVFEWET1800
 1801 PLVCPDEVKT DGCSLTDEQL YYSFNLSSLS KSTFKVTRGP HTYSVGVCTA AAGLDEGGCK1860
 1861 DGAVCLLSGS KGASFGRLAS MKLDYRHQDE AVILSYANGD TCPPETEDGE PCVFPFVFNG1920
 1921 KSYEECVVES RARLWCATTA NYDRDHEWGF CKHSTSHRTS VIIFKCDEDA DVGRPQVFSE1980
 1981 VRGCEVTFEW KTKVVCPPKK MECKFVQKHR TYDLRLLSSL TGSWSFVHNG ASYYINLCQK2040
 2041 IYKGPQDCSE RASVCKKSTS GEVQVLGLVH TQKLDVVDDR VIVTYSKGHY CGDNKTASAV2100
 2101 IELTCAKTVG RPSFTRFDVD SCTYHFSWDS RAACAVKPQE VQMVNGTITN PANGRSFSLG2160
 2161 DIYFKRFSAS GDVRTNGDRY IYEIQLSSIT GSSSPACSGA SICQRKANDQ HFSRKVGTSN2220
 2221 QTRYYVQDGD LDVVFTSSSK CGKDKTKSVS STIFFHCDPL VKDGIPEFSH ETADCQYLFS2280
 2281 WHTSAVCPLG AGFDEEIAGD DAQEHKGLSE RSQAVGAVLS LLLVALTACL LTLLLYKKER2340
 2341 REMVMSRLTN CCRRSANVSY KYSKVNKEEE ADENETEWLM EEIQPPAPRP GKEGQENGHV2400
 2401 AAKSVRAADT LSALHGDEQD SEDEVLTLPE VKVRPPGRAP GAEGGPPLRP LPRKAPPPLR2460
 2461 ADDRVGLVRG EPARRGRPRA AATPISTFHD DSDEDLLHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle