YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPPB_BLAEM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAALRLTA KRNVRSLATA SSSSYPGALL NVPKTQVTRL PNGLTVATES NPALATATVG  60
   61 VWIDSGSRAE TKANNGVAHF LEHISFKGTK QRTQSGLEIE IENMGGHLNA YTSREQTVYY 120
  121 AKLFSQDVAK GVNILGDILQ NSTLDPGAID RERAVILREA EEVDKQVEEV VFDHLHAAAF 180
  181 PENALGYTIL GPKENIQTLS QADLQAYIKN NYTADRMVVV GAGNVDHAEL CKLAETNFGK 240
  241 LPQGSGKAKF VRPAFTGSDV RIRVDDMPTA HIALAVEGAS WTSADHWPLL VASAMIGSYD 300
  301 RAAGNAHPSS KLAQIVAKHN LANSFTSFNT TYSDTGLWGI YIQSNNRDNL DDLAHFTVRE 360
  361 WMRLATAPSE GEVAIAKQQL KTSLLLALDG TTPVAEEIGR QMLAYGRRLS PFEIDRLVDA 420
  421 VTVEDVKRVA NEFIYDRDLA IVAVGPVECL PDYNRIRSAM NLLRY

Type	Start	End	Confidence
Signal Peptide	1	30	0.70
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	465	0.99