YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MR1AL_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CHSLKYDKLF SNKNTVCYVI LVWALTVLAI VPNWFVESLQ YDPRVFSCTF AQSVSSLYTI  60
   61 MVVVVHFIVP IGIVTYCYLR IWILVIQVPR RVKPDSRPKI KPHDFRNFLT MFVVFVLFAV 120
  121 CWAPLNFIGL AVAIHPRLGQ SIPEWLFTAS YF

Type	Start	End	Confidence
Cytoplasmic	1	14	0.94
Transmembrane Helix	15	36	0.91
Non-Cytoplasmic	37	59	0.91
Transmembrane Helix	60	84	0.86
Cytoplasmic	85	106	0.93
Transmembrane Helix	107	134	0.85
Non-Cytoplasmic	135	152	0.95