YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIAA_PHOLL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQKTQHLP TAIFVMGPTA SGKTALSVAL RQHLPVELIS VDSALIYRGM DIGTAKPTTE  60
   61 EQALAPHRLI NILDPSQPYS AADFCHDALK EMAEITASGR IPLLVGGTML YFKALLEGLS 120
  121 PLPSANPVIR AQIEQQAAEQ GWDALHQQLQ KIDPAAALRI HPNDPQRLSR ALEVFLISGK 180
  181 TLTELTTLSG ESLPYRVHQF AIAPAKRELL HQRIEARFHQ MLESGFEEEV KALYARHDLH 240
  241 VDLPSIRCVG YRQMWSYLSG EIDYDEMIYR GICATRQLAK RQITWLRGWK SVHWLDSSQP 300
  301 EQALSTVMQV VSA

Type	Start	End	Confidence
Signal Peptide	1	22	0.52
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	313	0.98