YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIAA_HAEIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPTAIFLMG PTASGKTDLA IQLRSQLPVE VISVDSALIY KGMDIGTAKP SKEELALAPH  60
   61 RLIDILDPSE SYSAMNFRDD ALREMADITA QGKIPLLVGG TMLYYKALIE GLSPLPSADE 120
  121 NIRAELEQKA AQQGWAALHT ELAKIDPISA ARINPSDSQR INRALEVFYI TGKSLTELTE 180
  181 EKGEALPYDF VQFAIAPQDR HVLHERIEQR FHKMIELGFQ AEVEKLYARG DLNINLPSIR 240
  241 CVGYRQMWEY LQGDYAYEEM IFRGICATRQ LAKRQLTWLR GWKTPIQWLD SLQPQQAKET 300
  301 VLRHLDSYQK G

Type	Start	End	Confidence
Signal Peptide	1	15	0.84
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	311	0.99