YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MEL_SACMI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYIYLFITA AAVTGALGSS PSYNGLGLTP QMGWDNWNTF ACDVSEQLLL NTADRISEIG  60
   61 LKDLGYKYVI LDDCWSSGRN SNGTLVADKN KFPNGMDHVA RHLHNNNFLF GMYSSAGEYT 120
  121 CAGYPGSLGH EQEDAEFFAR NGVDYLKYDN CYNKGKFGTP ETSYKRYKAM SDALNKTGRP 180
  181 IFYSLCNWGQ DLTFYWGSDI ANSWRMSGDI YPEFDRPDSR CPCDGDQYDC SYAGFHCSIM 240
  241 NILNKAAPMG QNAGIGGWND LDNLEVGVGN LTDDEEKAHF SMWAMVKSPL IIGADVNHLK 300
  301 ESSYSIYSQA SVIAINQDPK GVPATRVWRH YVSQTDKYGK GEIQLWSCPL DNGDQVIALL 360
  361 NGSNKKRPMN ASLEDIFFDS YLGSEELSSS WDIYDLWANR IDNTIASNIL KNNKVTNSSL 420
  421 YNATELSYKE GLSKNDTRLF GVQIGTVSPG GLLNTTVPAH GVALYRLRRS R

Type	Start	End	Confidence
Signal Peptide	1	18	0.96
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	471	0.98