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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mec-4
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWMQNLKNY QHLRDPSEYM SQVYGDPLAY LQETTKFVTE REYYEDFGYG ECFNSTESEV  60
   61 QCELITGEFD PKLLPYDKRL AWHFKEFCYK TSAHGIPMIG EAPNVYYRAV WVVLFLGCMI 120
  121 MLYLNAQSVL DKYNRNEKIV DIQLKFDTAP FPAITLCNLN PYKASLATSV DLVKRTLSAF 180
  181 DGAMGKAGGN KDHEEEREVV TEPPTTPAPT TKPARRRGKR DLSGAFFEPG FARCLCGSQG 240
  241 SSEQEDKDEE KEEELLETTT KKVFNINDAD EEWDGMEEYD NEHYENYDVE ATTGMNMMEE 300
  301 CQSERTKFDE PTGFDDRCIC AFDRSTHDAW PCFLNGTWET TECDTCNEHA FCTKDNKTAK 360
  361 GHRSPCICAP SRFCVAYNGK TPPIEIWTYL QGGTPTEDPN FLEAMGFQGM TDEVAIVTKA 420
  421 KENIMFAMAT LSMQDRERLS TTKRELVHKC SFNGKACDIE ADFLTHIDPA FGSCFTFNHN 480
  481 RTVNLTSIRA GPMYGLRMLV YVNASDYMPT TEATGVRLTI HDKEDFPFPD TFGYSAPTGY 540
  541 VSSFGLRLRK MSRLPAPYGD CVPDGKTSDY IYSNYEYSVE GCYRSCFQQL VLKECRCGDP 600
  601 RFPVPENARH CDAADPIARK CLDARMNDLG GLHGSFRCRC QQPCRQSIYS VTYSPAKWPS 660
  661 LSLQIQLGSC NGTAVECNKH YKENGAMVEV FYEQLNFEML TESEAYGFVN LLADFGGQLG 720
  721 LWCGISFLTC CEFVFLFLET AYMSAEHNYS LYKKKKAEKA KKIASGSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle