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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MDR3_CRIGR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEAARNGT ARRPGTVEGD FELGSISNQG RNKKKKVNLI GPLTLFRYSD WQDKLFMLLG  60
   61 TIMAIAHGSG LPLMMIVFGE MTDKFVNNAG NFSLPVNFSL SMINPGRILE EEMTRYAYYY 120
  121 SGLGGGVLVA AYIQVSFWTL AAGRQIKKIR QNFFHAILRQ EMGWFDIKGT TELNTRLTDD 180
  181 ISKISEGIGD KVGMFFQAVA TFFAGFIVGF IRGWKLTLVI MAISPILGLS AAVWAKILST 240
  241 FSDKELAAYA KAGAVAEEAL GAIRTVIAFG GQNKELERYQ KHLENAKKIG IKKAISANIS 300
  301 MGIAFLLIYA SYALAFWYGS TLVISKEYTI GNAMTVFFSI LIGAFSVGQA APCIDAFANA 360
  361 RGAAYVIFDI IDNNPKIDSF SERGHKPDSI KGNLDFSDVH FSYPSRANIK ILKGLNLKVQ 420
  421 SGQTVALVGN SGCGKTTTLQ LLQRLYDPTE GTISIDGQDI RNFNVRYLRE IIGVVSQEPV 480
  481 LFSTTIAENI RYGRGNVTME EIKKAVKEAN AYEFIMKLPQ KFDTLVGERG AQLSGGQKQR 540
  541 IAIARALVRN PKILLLDEAT SALDTESEAE VQAALDKARE GRTTIVIAHR LSTVRNADVI 600
  601 AGFEDGVIVE QGSHSELMQK EGVYFKLVNM QTSGSQILSQ EFEVELSEEK AADGMTPNGW 660
  661 KSHIFRNSTK KSLKSSRAHH HRLDVDADEL DANVPPVSFL KVLKLNKTEW PYFVVGTVCA 720
  721 IVNGALQPAI SIILSEMIAI FGPGDDAVKQ QKCNLFSLVF LGLGVLSFFT FFLQGFTFGK 780
  781 AGEILTTRLR SMAFKAMLRQ DMSWFDDYKN STGALSTRLA TDRAQVQGAT GTRLALIAQN 840
  841 TANLGTGIII SFIYGWQLTL LLLSVVPFIA VSGIVEMKML AGNAKRDKKA LEAAGKIATE 900
  901 AIENIRTVVS LTQERKFESM YVEKLHEPYR NSVQMAHIYG ITFSISQAFM YFSYAGCFRF 960
  961 GAYLIVNGHM RFRDVILVFS AIVFGAVALG HASSFAPDYA KAKLSAAHLF SLFERQPLID1020
 1021 SYSGEGLWPD KFEGSVTFNE VVFNYPTRAN MPVLQGLSLE VKKGQTLALV GSSGCGKSTV1080
 1081 VQLLERFYDP MAGTVLLDGQ EAKKLNIQWL RAQLGIVSQE PVLFDCSIAE NIAYGDNSRV1140
 1141 VSQDEIVRAA KAANIHPFIE TLPQKYKTRV GDKGTQLSGG QKQRLAIRRA LIRQPRVLLL1200
 1201 DEATSALDTE SEKVVQEALD KAREGRTCIV IAHRLSTIQN ADLIVVIQNG KVKEHGTHQQ1260
 1261 LLAQKGIYFS MVNIQAGAQN S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle