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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MDR2_CRIGR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFEEDFSAR ADKDFLKMGR KSKKEKKEKE NPNVGIFGMF RYADWLDKLY MVLGTLAAVL  60
   61 HGTSLPLLML VFGNMTDSFT KAETSIWPNM TNQSEINNTE VISGSLEEDM ATYAYYYTGI 120
  121 GAGVLIVAYI QVSFWCLAAG RQINKIRQKF FHAIMNQEIG WFDVHDIGEL NTRLTDDVSK 180
  181 INDGIGDKIG MFFQSIATFL AAFIVGFISG WKLTLVILAV SPLIGLSSAM WAKVLTSFTN 240
  241 KELQAYAKAG AVAEEVLAAI RTVIAFGGQN KELERYNKNL EEAKNVGIKK AVTANISIGI 300
  301 AYLLVYASYA LAFWYGTSLV LSNEYSVGQV LTVFFSILFG TFSIGHIAPN IEVFANARGA 360
  361 AYEIFKIIDN EPSIDSFSTQ GHKPDSVMGN LEFKNVHFSY PSRSGIKILK GLNLKVQSGQ 420
  421 TVALVGKSGC GKSTTVQLLQ RLYDPTEGVV SIDGQDIRTI NVRYLREIIG VVSQEPVLFA 480
  481 TTIAENIRYG RENVTMDEIE KAVKEANAYD FIMKLPHKFD TLVGERGAQL SGGQKQRIAI 540
  541 ARALVRNPKI LLLDEATSAL DTESEAVVQA ALDKAREGRT TIVIAHRLST VRNADVIAGF 600
  601 DGGVIVEQGN HEELMKEKGI YCRLVMMQTR GNEVELGSEA DGSQSDTIAS ELTSEEFKSP 660
  661 SVRKSTCRSI CGSQDQERRV SVKEAQDEDV PLVSFWGILK LNITEWPYLV VGVLCAVING 720
  721 CMQPVFSIVF SGIIGVFTRD DDPKTKQQNC NLFSLFFLVM GMICFVTYFF QGFTFGKAGE 780
  781 ILTKRLRYMV FKSMLRQDIS WFDDHRNSTG ALTTRLASDA ANVKGAMSSR LAGITQNVAN 840
  841 LGTGIIISLV YGWQLTLLLV VIAPLIILSG MMEMKVLSGQ ALKDKKELEV SGKIATEAIE 900
  901 NFRTVVSLTR EQKFENMYAQ SLQIPYRNAL KKAHVFGITF SFTQAMMYFS YAACFRFGAY 960
  961 LVAHQIMTFE NVMLVFSAVV FGAIAAGNAS SFAPDYAKAK VSASHIIRIM EKIPSIDSYS1020
 1021 TRGLKPNWLE GNVKFNEVVF NYPTRPDIPV LQGLSLEVKK GQTLALVGSS GCGKSTVVQL1080
 1081 LERFYDPMAG TVFLDGKEIK QLNVQWLRAH LGIVSQEPIL FDCSIAENIA YGDNSRVVSQ1140
 1141 DEIERAAKEA NIHQFIESLP DKYNTRVGDK GTQLSGGQKQ RIAIARALVR QPHILLLDEA1200
 1201 TSALDTESEK VVQEALDKAR EGRTCIVIAH RLSTIQNADL IVVIQNGKVK EHGTHQQLLA1260
 1261 QKGIYFSMVQ AGAKRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle