YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MDH_COXBU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKHVKVAVT GAAGQIGYAL LFRLASGQAF GLDTTVDLHL LEIEPALPAL KGVVMELEDC  60
   61 AFPLLRNMVV TSDPRVAFND VNWALLVGAA PRKAGMERKD LLEKNGSIFA GQGKAINENA 120
  121 ASDVRIFVVG NPCNTNCLIA MNNAPDIPKD RFYAMTRLDQ NRAIGQLALK AGVDVPSVKN 180
  181 MIIWGNHSST QYPDFYHATI DGKPATEVIR DKNWLLNDFI SVIQQRGAAV IKARGASSAA 240
  241 SAANAALDSV WSLINTTPAD DNYSVALCAQ GQYGVDEGLI FSFPCRTENG VVSVIEEIEH 300
  301 NEFGQQKLKE TLDELREERD AVEALGLI

Type	Start	End	Confidence
Signal Peptide	1	27	0.71
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	328	0.99