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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANBA_CAPHI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRLLLLLA PCGAGFATEV VSISLRGNWK IHNGNGSLQL PAAVPGCVHS ALFNKRIIKD  60
   61 PYYRFNNLDY RWIALDNWTY IKKFKLHSDM SEWNKVNLVF EGIDTVAVVL LNSVPIGKTD 120
  121 NMFRRYSFDI THMVKAVNII EVRFQSPVIY ANQRSERHTA YWVPPNCPPP VQDGECHVNF 180
  181 IRKMQCSFGW DWGPSFPTQG IWKDVRIEAY NICHLNYFMF TPIYDNYMET WNLKIESSFD 240
  241 VVSSKLVSGE AIVAIPELNI QQRNNIELRH GERTVKLFVK IDKAVIVETW WPHGHGNQTG 300
  301 YDMTVTFELD GGLRFEKSAK VYFRTVELVE EPIQNSPGLT FYFKINGLPI FLKGSNWIPA 360
  361 DSFQDRVTSD MLRLLLQSVV DANMNALRVW GGGIYEQDEF YELCDELGIM IWQDFMFACA 420
  421 LYPTDEDFMD SVREEVTHQV RRLKSHPSII TWSGNNENEA ALMMGWYDTK PGYLHTYIKD 480
  481 YVTLYVKNIR TIVLEGDQTR PFIISSPTNG AKTTAEGWLS PNPYDLNYGD VHFYDYMSDC 540
  541 WNWRTFPKAR FVSEYGYQSW PSFSTLEKVS SEEDWSYESS FALHRQHLIN GNSEMLQQIE 600
  601 LHFKLPNSAD QLRRFKDTLY LTQVMQAQCV KTETEFYRRS RNEIVDGKGH TMGALYWQLN 660
  661 DIWQAPSWSS LEYGGKWKML HYFARRFFAP LLPVGFEDKD VLFIYGVSDL PSDHQMMLTV 720
  721 RVHTWSSLEL VCSELTNPFV MKAGESVVLY SKPVPELLKG CPGCTRQSCV VSFYLSTDGE 780
  781 LLSPINYHFL SSLKNAKGLH KANITATISQ QGNTFVFDLK TSAVAPFVWL DVGSIPGRFS 840
  841 DNGFLMTEKT RTVFFYPWKP TSKSELEQSF HVTSLADTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle