YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7513458
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGGLLPLF SSPAGGGLGG GLGGGLGGGG GGGGRKGSGP SAFRLTEKFV LLLVFSAFIT  60
   61 LCFGAIFFLP DSSKLLSGVL FHSSPALQPA ADHKPGPGAR AEDAADGRAR PGEEGAPGDP 120
  121 AAALEDNLAR IRENHERALM EAKETLQKLP EEIQRDILME KEKVAQDQMS NRMGFRLPPV 180
  181 YLVPLIGAID REPADAAVRE KRAKIKEMMK HAWNNYKLYA WGKNELKPVS KGGHSSSLFG 240
  241 NIKGATIVDA LDTLFIMKMK NEFEEAKAWV EEHLNFNVNA EVSVFEVNIR FIGGLISAYY 300
  301 LSGEEIFRKK AVELGVKLLP AFYTPSGIPW ALLNIKSGIG RNWPWASGGS SILAEFGTLH 360
  361 LEFIHLSYLS GNPFFAEKVM NIRKVLNNLE KPQGLYPNYL NPNSGQWGQY HVSVGGLGDS 420
  421 FYEYLLKAWL MSDKTDLEAK KMYFDAIKAI ETHLIRKSRN GLTYIAEWKG GLLEHKMGHL 480
  481 TCFAGGMFAL GADDAPDGLT QHYLQLGAEI ARTCHESYSR TFVKLGPEAF RFDGGVEAIA 540
  541 TRQNEKYYIL RPEVVETYLY MWRLTHDPKY RKWAWEAVEA LEKHCRVNGG YSGLRDVYVS 600
  601 AQTYDDVQQS FFLAETLKYL YLIFSDDDLL PLEHWIFNTE AHPLPVLSRN IKKVEDNEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle