YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LRGA_BACCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKMSTKKVY SFLLQAFIFS AIMLISNIIA THLPIPMPSS VIGLVILFSL LCLKVIKLEQ  60
   61 VESLGTALTG IIGFLFVPSG ISVINSLGVM GQYFVQILTV IVVATVILLA VTGLFAQFIL 120
  121 GKDEKETEDI KELKVVNKGR KHGKVA

Type	Start	End	Confidence
Cytoplasmic	1	8	0.98
Transmembrane Helix	9	30	0.91
Non-Cytoplasmic	31	36	0.70
Transmembrane Helix	37	56	0.92
Cytoplasmic	57	64	0.83
Transmembrane Helix	65	87	0.89
Non-Cytoplasmic	88	94	0.76
Transmembrane Helix	95	116	0.92
Cytoplasmic	117	146	0.93