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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LPXK_SHEON
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQALVNKIWY QGHPLRWLLL PLSALFAFIT AFRRSLFRLG IKSQTTLPVP VIVVGNITVG  60
   61 GSGKTPTVIY LIELLRNQGF NPGVISRGYG AQFQGVKVVT VKDAATDVGD EPAMIVARTG 120
  121 VPMVVGAKRV ETAKALLTQF AVDVIICDDG LQHYALGRDI ELVVIDGKRG LGNRNLLPAG 180
  181 PLREGEWRLN QVDFVIVNGG PAVANQYEMQ LRPCAVLPVS PAVTAEFDST QPLVAMAGIG 240
  241 HPARFFETLT QQGYQVALSH SFDDHQAYDK RQLCELAASR PLMMTEKDAV KCRDFAQENW 300
  301 WYLAVDAKLS PQFDQQLLSR LRSVAAAKKG KSHGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle