YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LOLB_PSEPK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLRHCITFT LIALLAGCAG FGSREALQGH GDPQQWRAHK AQLSSLDGWQ INGKVGIRAP  60
   61 RDSGSGTLFW LQRQDYYDIR LAGPLGRGAA RLTGRPGGVV LEVANQGRYE ATSPEALLEE 120
  121 QLGWQLPVSH LVWWVRGLPA PDSKSKLTLD GDSRLASLDQ DGWQVQYLSY TEQNGYWLPE 180
  181 RLKLHGKDLD VTLVVKDWQP RQLGH

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	205	0.99