YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LOLA_SALHS
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKMAIACAL LSSVVASSVW ADAASSLKSR LDKVSSFHAT FTQKVTDGSG AAVQEGQGDL  60
   61 WVKRPNLFNW HMTQPDESIL VSDGKTLWFY NPFVEQATAT WLKDATGNTP FMLIARNQAS 120
  121 DWQQYNIKQD GDNFVLTPKA SNGNLKQFTI NVGRDGTIHQ FSAVEQDDQR SAYQLKSQQN 180
  181 GAVDPSKFTF TPPQGVTIDD QRK

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	203	0.99