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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LKTA_ACTAC, LKTA...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTTLPNTK QQAAQFANSV ADRAKENIDA AKEQLQKALD KLGKTGKKLT LYIPKNYKKG  60
   61 NGLTALIKAA QKLGIEVYHE GKDGPALTNG ILNTGKKLLG LTERGLTLFA PELDKWIQGN 120
  121 KHLSNSVGST GNLTKAIDKV QSVLGTLQAF LNTAFSGMDL DALIKARQNG KNVTDVQLAK 180
  181 ASLNLINELI GTISSITNNV DTFSKQLNKL GEALGQVKHF GSFGDKLKNL PKLGNLGKGY 240
  241 GALSGVLSAI SAALLLANKH ADTATKAAAA AELTNKVLGN IGKAITQYLI AQRAAAGLST 300
  301 TGPVAGLIAS VVSLAISPLS FLGIAKQFDR ARMLEAYSKR FKKFGYNGDS LLGQFYKNTG 360
  361 IADAAITTIN TVLSAIAAGV GAASAGSLVG APIGLLVSAI TSLISGILDA SKQAVSEHIA 420
  421 NQLADKIKAW ENKYGKNYSE NGYDARHSAF LEDSLKLFNE LREKYKTENI LSITQQGWDQ 480
  481 RIGELAGITR NGDRIQSGKA YVDYLKKGEE LAKHSDKFTK QILDPIKGNI DLSGIKGSTT 540
  541 LTFLNPLLTA GKEERKTRQS GKYEFITELK VKGRTDWKVK GVPNSNGVYD FSNLIQHAVT 600
  601 RDNKVLEARL IANLGAKDDY VFVGSGSTIV NAGDGYDVVD YSKGRTGALT IDGRNATKAG 660
  661 QYKVERDLSG TQVLQETVSK QETKRGKVTD LLEYRNYKLD YYYTNKGFKA HDELNSVEEI 720
  721 IGSNLRDKFY GSKFNDVFHG HDGDDLIYGY DGDDRLYGDN GNDEIHGGQG NDKLYGGAGN 780
  781 DRLFGEYGNN YLDGGEGDDH LEGGNGSDIL RGGSGNDKLF GNQGDDLLDG GEGDDQLAGG 840
  841 EGNDIYVYRK EYGHHTITEH SGDKDKLSLA NINLKDVSFE RNGNDLLLKT NNRTAVTFKG 900
  901 WFSKPNSSAG LDEYQRKLLE YAPEKDVHDL RDNLSYSEVK STNHSIIKLK KLSVKMGSGL 960
  961 LRKTLIIFLI RVGTKRQFHL KSLPDLLRIK VSQVALCLLL VRQVCLHKSP VCQMILVVLF1020
 1021 QQPVVLVHPV KRYPLRHCRP IITLTLTQIR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle