YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|243480
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTMRSRVV AGAVACAMSI APFAGTTAVM TLATTHAAMA ATAPADGYAA TRYPIILVHG  60
   61 LSGTDKYAGV VEYWYGIQED LQQNGATVYV ANLSGFQSDD GANGRGEQLL AYVKTVLAAT 120
  121 GATKVNLVGH SQGGLTSRYV AAVAPDLVAS VTTIGTPHRG SEFADFVQNV LAYDPTGLSS 180
  181 SVIAAFVNVF GILTSSSHNT NQDALAALQT LTTARAATYN QNYPSAGLGA PGSCQTGAPT 240
  241 ETVGGNTHLL YSWAGTAIQP TLSVFGITGA TDTSTVPLVD LANVLDPSTL ALFGTGTVMI 300
  301 NRGSGQNDGL VSKCSALYGK VLSTSYKWNH LDEINQLLGV RGAYAEDPVA VIRTHANRLK 360
  361 LAGV

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	364	0.97